MLOC_39596 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.636611.618662.854561.90374
LEAShoots from the seedlings (10 cm shoot stage)3.020751.795112.348631.61205
INF1Young developing inflorescences (5mm)1.949042.052242.094931.27249
INF2Developing inflorescences (1-1.5 cm)2.423273.350181.82682.18007
ROORoots from the seedlings (10 cm shoot stage)2.043822.2248201.76344
NODDeveloping tillers at six leaf stage, 3rd internode2.427594.471893.92639.68212
CAR5Developing grain, bracts removed (5 DPA)2.210621.411641.243491.28235
CAR15Developing grain, bracts removed (15 DPA)0.4985461.193110.9077121.06596



CDS Structure of MLOC_39596






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39596.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_39596.1CUST_5543_PI427708083AvailableAvailablecontig_2553986 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g46890.2 -1 6e-13 69 33/42 (79%) 13104.m04734 protein pre-mRNA-processing factor 31, putative, expressed
TAIR PP10None-----