- Predicted Gene MLOC_39596
MLOC_39596 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.63661 | 1.61866 | 2.85456 | 1.90374 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.02075 | 1.79511 | 2.34863 | 1.61205 |
INF1 | Young developing inflorescences (5mm) | 1.94904 | 2.05224 | 2.09493 | 1.27249 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.42327 | 3.35018 | 1.8268 | 2.18007 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.04382 | 2.22482 | 0 | 1.76344 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.42759 | 4.47189 | 3.9263 | 9.68212 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.21062 | 1.41164 | 1.24349 | 1.28235 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.498546 | 1.19311 | 0.907712 | 1.06596 |
CDS Structure of MLOC_39596
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39596.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g46890.2 |
-1 |
6e-13 |
69 |
33/42 (79%) |
13104.m04734 protein pre-mRNA-processing factor 31, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |