MLOC_39585 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.817842.8772.640473.02715
LEAShoots from the seedlings (10 cm shoot stage)18.17958.350719.018928.76652
INF1Young developing inflorescences (5mm)1.977132.960082.217012.09294
INF2Developing inflorescences (1-1.5 cm)6.482127.319757.563617.84564
ROORoots from the seedlings (10 cm shoot stage)8.612073.36212.872983.78747
NODDeveloping tillers at six leaf stage, 3rd internode0.9127866.645221.8989112.3168
CAR5Developing grain, bracts removed (5 DPA)2.3264812.263111.92968.63225
CAR15Developing grain, bracts removed (15 DPA)1.069840.4420350.9991792.05815



CDS Structure of MLOC_39585






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39585.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367562NoneNoneNoneNone
MLOC_39585.1CUST_2540_PI427708080AvailableAvailablecontig_2553960 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g33380.1 +2 2e-68 216 113/156 (72%) 13102.m03618 protein pectinesterase inhibitor domain containing protein, putative, expressed
TAIR PP10None-----