- Predicted Gene MLOC_39569
MLOC_39569 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.45387 | 1.18093 | 1.1261 | 1.26445 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.77687 | 0.771147 | 1.14993 | 1.08957 |
| INF1 | Young developing inflorescences (5mm) | 7.04588 | 7.40427 | 7.03189 | 6.09609 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.3895 | 8.1739 | 11.0546 | 11.3178 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.7797 | 2.66482 | 2.25778 | 3.2112 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.249571 | 0.269624 | 0.802778 | 1.20878 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.97168 | 4.25266 | 4.64301 | 4.18147 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.14877 | 2.20593 | 1.93833 | 4.91146 |
CDS Structure of MLOC_39569
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39569.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g16870.1 |
-2 |
5e-64 |
218 |
154/383 (40%) |
13109.m01612 protein A3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with A3 subfamily conserved sequence |
| TAIR PP10 |
AT5G19000.1 |
-2 |
5e-40 |
151 |
104/317 (33%) |
| Symbols: ATBPM1, BPM1 | BTB-POZ and MATH domain 1 | chr5:6342563-6344641 FORWARD LENGTH=407 |