- Predicted Gene MLOC_39563
MLOC_39563 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39563_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39563_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.34662 | 5.74527 | 6.58762 | 7.07622 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.14508 | 4.67799 | 4.2872 | 5.56082 |
INF1 | Young developing inflorescences (5mm) | 23.053 | 22.3756 | 24.6294 | 22.1639 |
INF2 | Developing inflorescences (1-1.5 cm) | 68.3743 | 67.3004 | 66.5084 | 85.0036 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.81701 | 4.3788 | 4.85365 | 6.87335 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.62484 | 14.4373 | 18.686 | 66.9233 |
CAR5 | Developing grain, bracts removed (5 DPA) | 34.8939 | 33.5867 | 32.4982 | 38.7857 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.27311 | 7.21302 | 8.87272 | 20.4602 |
CDS Structure of MLOC_39563
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39563.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g03570.1 |
+3 |
6e-114 |
347 |
181/263 (69%) |
13101.m00306 protein transcription factor X1, putative, expressed |
TAIR PP10 |
AT1G15910.1 |
+3 |
1e-73 |
243 |
128/256 (50%) |
XH/XS domain-containing protein | chr1:5465951-5468723 FORWARD LENGTH=634 |