- Predicted Gene MLOC_39554
MLOC_39554 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.69434 | 0.427202 | 0.133997 | 0.415267 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.277024 | 0 | 0.0969956 | 0.162385 |
| INF1 | Young developing inflorescences (5mm) | 7.55452 | 8.07286 | 7.65147 | 6.99403 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.96314 | 7.32024 | 7.22823 | 7.8151 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.348204 | 0.569929 | 0.611959 | 0.596319 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.033469 | 0.00506264 | 0.0209799 | 0.0218566 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0253718 | 0.0968839 | 0.0243587 | 0.055343 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0554074 | 0.0431353 | 0.0531012 | 0.132074 |
CDS Structure of MLOC_39554
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39554.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g42870.1 |
+2 |
4e-117 |
356 |
197/298 (66%) |
13102.m04754 protein MYB family transcription factor, putative, expressed |
| TAIR PP10 |
AT3G61250.1 |
+2 |
2e-68 |
228 |
130/216 (60%) |
| Symbols: AtMYB17, MYB17 | myb domain protein 17 | chr3:22671306-22672551 FORWARD LENGTH=299 |