MLOC_39546 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains109.36389.229689.14680
LEAShoots from the seedlings (10 cm shoot stage)60.249552.857157.29520
INF1Young developing inflorescences (5mm)140.555150.33143.2180
INF2Developing inflorescences (1-1.5 cm)102.595122.189105.8230
ROORoots from the seedlings (10 cm shoot stage)90.197594.629378.98180
NODDeveloping tillers at six leaf stage, 3rd internode56.776954.658331.70230
CAR5Developing grain, bracts removed (5 DPA)155.303160.197167.1260
CAR15Developing grain, bracts removed (15 DPA)73.512671.161166.82690



CDS Structure of MLOC_39546






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248344.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248344.1CUST_18544_PI427708080NoneNoneNone
MLOC_39546.1NoneAvailableNonecontig_2553810 (Mapped)
MLOC_5110.6NoneAvailableAvailablecontig_135895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----