MLOC_39522 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.129913.895315.82560
LEAShoots from the seedlings (10 cm shoot stage)16.47729.8805514.76160
INF1Young developing inflorescences (5mm)21.738920.087122.4650
INF2Developing inflorescences (1-1.5 cm)15.805213.34914.44150
ROORoots from the seedlings (10 cm shoot stage)8.6472712.905913.67320
NODDeveloping tillers at six leaf stage, 3rd internode2.277962.833677.033360
CAR5Developing grain, bracts removed (5 DPA)13.592218.053318.63450
CAR15Developing grain, bracts removed (15 DPA)3.887775.04283.979050



CDS Structure of MLOC_39522






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248623.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248623.1CUST_18582_PI427708080NoneNoneNone
MLOC_26885.1NoneAvailableNonecontig_1787358 (Not mapped)
MLOC_28079.1NoneAvailableNonecontig_1889095 (Mapped)
MLOC_39522.1NoneAvailableNonecontig_2553743 (Mapped)
MLOC_69162.1NoneAvailableAvailablecontig_5601 (Mapped)
MLOC_7313.1NoneAvailableNonecontig_1389905 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----