MLOC_39521 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.0969613.603714.420612.6424
LEAShoots from the seedlings (10 cm shoot stage)20.71063.786668.337558.74264
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.1131320.1853190.171144
ROORoots from the seedlings (10 cm shoot stage)2.320035.145374.22035.02049
NODDeveloping tillers at six leaf stage, 3rd internode0.5136392.80730.0388025.48542
CAR5Developing grain, bracts removed (5 DPA)12.955312.689213.585912.878
CAR15Developing grain, bracts removed (15 DPA)0.1399990.04072520.1006250.243591



CDS Structure of MLOC_39521






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364669
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364669CUST_24805_PI427708080NoneNoneNone
MLOC_39521.2NoneAvailableAvailablecontig_2553743 (Mapped)
MLOC_80201.1NoneAvailableNonecontig_89252 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----