MLOC_39511 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.859467.402968.398298.10185
LEAShoots from the seedlings (10 cm shoot stage)10.61836.560195.832846.77897
INF1Young developing inflorescences (5mm)14.807617.989617.771314.6109
INF2Developing inflorescences (1-1.5 cm)13.924813.79411.878515.0197
ROORoots from the seedlings (10 cm shoot stage)7.305285.541165.468617.29125
NODDeveloping tillers at six leaf stage, 3rd internode6.9958210.457310.753534.207
CAR5Developing grain, bracts removed (5 DPA)14.802415.249116.878915.4822
CAR15Developing grain, bracts removed (15 DPA)15.279113.71519.021736.3685



CDS Structure of MLOC_39511






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39511.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365011NoneNoneNoneNone
MLOC_39511.4CUST_2536_PI427708080AvailableAvailablecontig_2553727 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g44060.2 -3 0.0 825 399/465 (86%) 13106.m04625 protein phospholipase D. Active site motif family protein, expressed
TAIR PP10None-----