MLOC_3948 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.933972 | 1.02432 | 0.797795 | 1.17959 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.383089 | 0 | 0.246802 | 0.288988 |
| INF1 | Young developing inflorescences (5mm) | 2.80648 | 3.30882 | 3.66853 | 3.42333 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.14856 | 3.38908 | 3.68416 | 4.66258 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.709589 | 0.651565 | 0.666768 | 1.01632 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0690668 | 0.0185091 | 0.0149343 | 0.065148 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.811154 | 0.65947 | 0.566098 | 0.836816 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.1397 | 14.5247 | 11.4483 | 37.5668 |
CDS Structure of MLOC_3948
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3948.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g72190.1 |
+3 |
5e-64 |
218 |
181/390 (46%) |
13101.m07863 protein expressed protein |
| TAIR PP10 |
AT2G38800.1 |
+3 |
8e-23 |
102 |
47/69 (68%) |
Plant calmodulin-binding protein-related | chr2:16216999-16218837 FORWARD LENGTH=612 |