MLOC_39474 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.02445450.06810080.06136750.074718
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.2735590.1282410.127050.19978
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.9221221.694581.436541.71879
CAR15Developing grain, bracts removed (15 DPA)0.611950.577760.4978141.58046



CDS Structure of MLOC_39474






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39474.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372986NoneNoneNoneNone
MLOC_39474.1CUST_2534_PI427708080AvailableAvailablecontig_2553556 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g09200.1 +3 0.0 723 356/480 (74%) 13102.m01011 protein cytochrome P450 71D10, putative, expressed
TAIR PP10 AT2G24180.1 +3 2e-119 365 203/468 (43%) | Symbols: CYP71B6 | cytochrome p450 71b6 | chr2:10281890-10283589 FORWARD LENGTH=503