MLOC_3945 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.85733.386630.714639.189
LEAShoots from the seedlings (10 cm shoot stage)21.990318.463823.420820.4625
INF1Young developing inflorescences (5mm)48.892150.300558.933751.4293
INF2Developing inflorescences (1-1.5 cm)60.901864.039164.998376.9146
ROORoots from the seedlings (10 cm shoot stage)68.568334.920547.038755.8035
NODDeveloping tillers at six leaf stage, 3rd internode13.243115.53723.410961.4928
CAR5Developing grain, bracts removed (5 DPA)27.070528.856829.362631.161
CAR15Developing grain, bracts removed (15 DPA)12.001410.502311.420629.4098



CDS Structure of MLOC_3945






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372202
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372202CUST_25622_PI427708080NoneNoneNone
MLOC_3945.2NoneAvailableAvailablecontig_134465 (Mapped)
MLOC_43817.1NoneAvailableNonecontig_272850 (Not mapped)
MLOC_7966.1NoneAvailableNonecontig_1407024 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----