- Predicted Gene MLOC_39421
MLOC_39421 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.1562 | 17.8134 | 17.6426 | 16.4094 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.0686 | 2.3903 | 4.78709 | 5.74797 |
| INF1 | Young developing inflorescences (5mm) | 5.01332 | 2.86149 | 4.02103 | 3.37639 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.72222 | 8.38406 | 8.43489 | 7.65944 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.96726 | 7.86963 | 7.95898 | 7.28094 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.29707 | 3.4177 | 0.00778646 | 5.95283 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 24.3943 | 22.5906 | 22.468 | 21.8658 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.152998 | 0.051528 | 0.0622279 | 0.231171 |
CDS Structure of MLOC_39421
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39421.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g40810.1 |
-3 |
3e-108 |
333 |
260/390 (67%) |
13110.m03788 protein GATA zinc finger domain containing protein, expressed |
| TAIR PP10 |
AT2G45050.1 |
-3 |
4e-38 |
142 |
71/98 (72%) |
| Symbols: GATA2 | GATA transcription factor 2 | chr2:18582958-18583845 FORWARD LENGTH=264 |