MLOC_39392 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.696268.237264.9360
LEAShoots from the seedlings (10 cm shoot stage)53.437546.259746.0850
INF1Young developing inflorescences (5mm)99.642187.867476.9220
INF2Developing inflorescences (1-1.5 cm)75.411876.127465.02140
ROORoots from the seedlings (10 cm shoot stage)28.927352.66940.61660
NODDeveloping tillers at six leaf stage, 3rd internode14.168616.727724.47890
CAR5Developing grain, bracts removed (5 DPA)68.942260.188664.99270
CAR15Developing grain, bracts removed (15 DPA)11.657511.379412.74170



CDS Structure of MLOC_39392






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363507
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363507CUST_20726_PI427708080NoneNoneNone
MLOC_21728.3NoneAvailableAvailablecontig_1598211 (Mapped)
MLOC_27677.1NoneAvailableNonecontig_185321 (Mapped)
MLOC_28604.1NoneAvailableNonecontig_193303 (Not mapped)
MLOC_39392.1NoneAvailableNonecontig_2553213 (Mapped)
MLOC_65220.1NoneAvailableNonecontig_49917 (Mapped)
MLOC_8765.1NoneAvailableNonecontig_146078 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----