- Predicted Gene MLOC_39391
MLOC_39391 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39391_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39391_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 735.011 | 690.548 | 633.136 | 914.294 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 300.004 | 230.489 | 229.055 | 265.791 |
INF1 | Young developing inflorescences (5mm) | 996.778 | 998.042 | 987.662 | 1072.8 |
INF2 | Developing inflorescences (1-1.5 cm) | 794.537 | 706.79 | 756.636 | 1022.94 |
ROO | Roots from the seedlings (10 cm shoot stage) | 351.64 | 509.945 | 615.657 | 904.904 |
NOD | Developing tillers at six leaf stage, 3rd internode | 88.8324 | 86.2301 | 106.303 | 385.511 |
CAR5 | Developing grain, bracts removed (5 DPA) | 365.336 | 388.807 | 359.317 | 486.005 |
CAR15 | Developing grain, bracts removed (15 DPA) | 130.422 | 126.643 | 121.708 | 367.978 |
CDS Structure of MLOC_39391
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39391.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g38260.1 |
-2 |
7e-87 |
264 |
183/187 (98%) |
13103.m04154 protein 60S ribosomal protein L19-3, putative, expressed |
TAIR PP10 |
AT3G16780.1 |
-2 |
1e-78 |
242 |
162/185 (88%) |
Ribosomal protein L19e family protein | chr3:5708982-5710249 FORWARD LENGTH=209 |