MLOC_39385 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.09054.248084.167123.04087
LEAShoots from the seedlings (10 cm shoot stage)2.916623.095923.256042.44882
INF1Young developing inflorescences (5mm)6.813035.710378.288445.27602
INF2Developing inflorescences (1-1.5 cm)10.37257.393147.356828.35628
ROORoots from the seedlings (10 cm shoot stage)3.275744.069955.325264.61898
NODDeveloping tillers at six leaf stage, 3rd internode3.731892.347893.927397.49542
CAR5Developing grain, bracts removed (5 DPA)4.779214.994515.454054.40006
CAR15Developing grain, bracts removed (15 DPA)4.248192.415123.939447.68988



CDS Structure of MLOC_39385






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39385.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_39385.1CUST_12302_PI427708083AvailableAvailablecontig_2553198 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g43950.1 -3 5e-11 64 51/123 (41%) 13105.m04635 protein expressed protein
TAIR PP10None-----