MLOC_3938 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.189893.920179.703864.1057
LEAShoots from the seedlings (10 cm shoot stage)74.446834.449131.397238.7
INF1Young developing inflorescences (5mm)86.125587.617989.558261.2888
INF2Developing inflorescences (1-1.5 cm)86.696489.559585.110781.8091
ROORoots from the seedlings (10 cm shoot stage)29.707563.732440.951458.1246
NODDeveloping tillers at six leaf stage, 3rd internode65.84364.233830.5524189.685
CAR5Developing grain, bracts removed (5 DPA)78.843172.088481.995462.0155
CAR15Developing grain, bracts removed (15 DPA)20.722317.567820.640635.884



CDS Structure of MLOC_3938






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3938.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3938.1CUST_11757_PI427708080AvailableAvailablecontig_134447 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g37750.1 +1 0.0 843 428/472 (91%) 13107.m03888 protein ATMIN7, putative, expressed
TAIR PP10 AT3G43300.1 +1 0.0 652 351/490 (72%) | Symbols: ATMIN7, BEN1 | HOPM interactor 7 | chr3:15234235-15245034 REVERSE LENGTH=1758