MLOC_39356 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.239910.440211.9113.124
LEAShoots from the seedlings (10 cm shoot stage)16.19827.020627.165622.0941
INF1Young developing inflorescences (5mm)8.480099.2619.184097.91447
INF2Developing inflorescences (1-1.5 cm)7.894568.505498.48119.53476
ROORoots from the seedlings (10 cm shoot stage)23.111417.110219.080725.2601
NODDeveloping tillers at six leaf stage, 3rd internode21.974523.896321.64687.5821
CAR5Developing grain, bracts removed (5 DPA)11.718511.659912.653812.3844
CAR15Developing grain, bracts removed (15 DPA)5.437164.852445.4408912.1621



CDS Structure of MLOC_39356






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371078
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371078CUST_22068_PI427708080NoneNoneNone
MLOC_39356.1NoneAvailableAvailablecontig_2553111 (Mapped)
MLOC_40956.1NoneAvailableNonecontig_2567308 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----