MLOC_3932 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 123.62 | 74.8994 | 77.528 | 91.0826 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 62.9449 | 53.2072 | 74.2194 | 53.3774 |
| INF1 | Young developing inflorescences (5mm) | 82.2868 | 98.6263 | 98.4135 | 80.3028 |
| INF2 | Developing inflorescences (1-1.5 cm) | 68.5487 | 83.1406 | 70.7614 | 84.6879 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 156.02 | 96.7989 | 93.9761 | 129.844 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 84.613 | 117.715 | 108.182 | 345.045 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 78.0067 | 80.5278 | 80.5048 | 80.7875 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 37.9076 | 35.3647 | 30.4937 | 86.3951 |
CDS Structure of MLOC_3932
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3932.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g41220.1 |
+1 |
3e-89 |
269 |
134/146 (92%) |
13112.m04298 protein ubiquitin-conjugating enzyme, putative, expressed |
| TAIR PP10 |
AT3G52560.1 |
+1 |
1e-82 |
251 |
121/146 (83%) |
| Symbols: UEV1D-4, MMZ4, UEV1D | ubiquitin E2 variant 1D-4 | chr3:19494678-19495954 REVERSE LENGTH=146 |
