MLOC_39303 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.60718.953410.2829.27026
LEAShoots from the seedlings (10 cm shoot stage)226.516327.985483.39253.658
INF1Young developing inflorescences (5mm)7.274774.386666.442944.4675
INF2Developing inflorescences (1-1.5 cm)2.0432.342113.199122.26034
ROORoots from the seedlings (10 cm shoot stage)2.449011.677125.568192.325
NODDeveloping tillers at six leaf stage, 3rd internode68.494180.2453175.762259.009
CAR5Developing grain, bracts removed (5 DPA)24.178231.31827.991923.1224
CAR15Developing grain, bracts removed (15 DPA)4.039694.478253.64348.31816



CDS Structure of MLOC_39303






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39303.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_39303.1NoneAvailableAvailablecontig_2552974 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01380.2 +3 9e-11 58 24/31 (77%) 13108.m00057 protein 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
TAIR PP10None-----