MLOC_39295 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.29616900.518419
LEAShoots from the seedlings (10 cm shoot stage)0.183075000.193136
INF1Young developing inflorescences (5mm)1.931413.562453.001872.15782
INF2Developing inflorescences (1-1.5 cm)7.042510.735713.214910.0634
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode1.093662.596040.02968876.98292
CAR5Developing grain, bracts removed (5 DPA)79.805968.213575.55666.8282
CAR15Developing grain, bracts removed (15 DPA)7.174588.0036210.003316.9572



CDS Structure of MLOC_39295






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39295.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_39295.1CUST_5487_PI427708083AvailableAvailablecontig_2552946 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g41710.1 +2 2e-57 196 87/122 (71%) 13106.m04355 protein CW-type Zinc Finger, putative, expressed
TAIR PP10None-----