- Predicted Gene MLOC_39291
MLOC_39291 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39291_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39291_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.53222 | 4.00748 | 3.59422 | 4.47329 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.383911 | 0.179514 | 0.822853 | 0.361813 |
INF1 | Young developing inflorescences (5mm) | 0.0375729 | 0 | 0 | 0.034137 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.7591 | 5.57722 | 7.42087 | 7.23019 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.883982 | 0.678758 | 0.330569 | 1.40782 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.147825 | 0.419854 | 0.564013 | 0.373061 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.55353 | 1.94917 | 2.48128 | 5.80431 |
CDS Structure of MLOC_39291
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39291.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g13330.1 |
-1 |
4e-88 |
269 |
162/201 (81%) |
13102.m01479 protein bet v I allergen family protein, putative |
TAIR PP10 |
AT2G26040.1 |
-1 |
2e-65 |
209 |
116/178 (65%) |
| Symbols: PYL2, RCAR14 | PYR1-like 2 | chr2:11094832-11095404 REVERSE LENGTH=190 |