- Predicted Gene MLOC_39224
MLOC_39224 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39224_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39224_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.79926 | 1.95763 | 2.30285 | 1.29705 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.81099 | 2.25018 | 1.56721 | 1.42801 |
INF1 | Young developing inflorescences (5mm) | 1.84759 | 2.97373 | 3.60671 | 1.36042 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.88166 | 4.7328 | 5.14832 | 4.59634 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.746766 | 0.707101 | 0.481444 | 0.580187 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.258516 | 0.717227 | 0.900994 | 1.73211 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.68445 | 3.48771 | 4.02634 | 1.88583 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.08438 | 2.80355 | 5.4423 | 5.05718 |
CDS Structure of MLOC_39224
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39224.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g13130.1 |
-3 |
3e-15 |
70 |
36/47 (77%) |
13102.m01454 protein KH domain-containing protein, putative, expressed |
TAIR PP10 |
AT2G25970.1 |
-3 |
9e-13 |
67 |
34/47 (72%) |
KH domain-containing protein | chr2:11071844-11075604 REVERSE LENGTH=632 |