MLOC_392 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.51272500
LEAShoots from the seedlings (10 cm shoot stage)0.786811000
INF1Young developing inflorescences (5mm)1.20121.368572.733740
INF2Developing inflorescences (1-1.5 cm)1.324491.707161.756010
ROORoots from the seedlings (10 cm shoot stage)01.1848500
NODDeveloping tillers at six leaf stage, 3rd internode1.185131.062060.4420740
CAR5Developing grain, bracts removed (5 DPA)1.748431.233052.401180
CAR15Developing grain, bracts removed (15 DPA)2.401531.594340.6954910



CDS Structure of MLOC_392






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK364024
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364024CUST_14187_PI427708083NoneNoneNone
MLOC_30674.2NoneAvailableNonecontig_2117731 (Not mapped)
MLOC_30686.1NoneAvailableAvailablecontig_2118705 (Not mapped)
MLOC_392.1NoneAvailableNonecontig_1027047 (Not mapped)
MLOC_50236.1NoneAvailableNonecontig_357242 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----