- Predicted Gene MLOC_39192
MLOC_39192 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 144.568 | 81.7132 | 96.9548 | 102.751 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 55.268 | 37.3406 | 72.5678 | 46.3719 |
| INF1 | Young developing inflorescences (5mm) | 32.4187 | 43.1046 | 39.4528 | 33.7024 |
| INF2 | Developing inflorescences (1-1.5 cm) | 21.0173 | 26.2248 | 17.0765 | 24.9677 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 151.863 | 69.2375 | 72.7949 | 94.6836 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 100.704 | 112.328 | 93.5653 | 327.117 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.6609 | 34.0344 | 29.0012 | 31.3602 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.71355 | 7.74054 | 6.23298 | 16.7827 |
CDS Structure of MLOC_39192
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39192.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g20660.1 |
-3 |
1e-66 |
204 |
97/108 (90%) |
13109.m01965 protein UPF0041 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G20090.2 |
-3 |
6e-62 |
192 |
90/106 (85%) |
Uncharacterised protein family (UPF0041) | chr5:6787246-6788000 REVERSE LENGTH=110 |