- Predicted Gene MLOC_39177
MLOC_39177 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.4666 | 19.7285 | 17.3069 | 15.1339 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.07425 | 3.83438 | 6.30989 | 5.23072 |
| INF1 | Young developing inflorescences (5mm) | 48.0704 | 45.2354 | 37.9066 | 31.1999 |
| INF2 | Developing inflorescences (1-1.5 cm) | 32.4343 | 28.0085 | 28.6827 | 27.3483 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.61346 | 14.9339 | 16.4921 | 13.4811 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.348248 | 0.312345 | 0.737348 | 1.17195 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.8594 | 18.6906 | 21.6999 | 15.5312 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.30441 | 3.64855 | 3.09728 | 6.1322 |
CDS Structure of MLOC_39177
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39177.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g18840.1 |
-3 |
0.0 |
585 |
299/393 (76%) |
13103.m02257 protein NUC189 domain containing protein, expressed |
| TAIR PP10 |
AT5G11240.1 |
-3 |
2e-82 |
270 |
161/396 (41%) |
transducin family protein / WD-40 repeat family protein | chr5:3582949-3586782 FORWARD LENGTH=615 |