MLOC_39175 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.5468490.5389170.64939
LEAShoots from the seedlings (10 cm shoot stage)1.40650.9920662.205911.1178
INF1Young developing inflorescences (5mm)0.1384300.1797020.179556
INF2Developing inflorescences (1-1.5 cm)000.1694640.266556
ROORoots from the seedlings (10 cm shoot stage)4.494591.367071.660311.84651
NODDeveloping tillers at six leaf stage, 3rd internode38.2672101.878779.178613.506
CAR5Developing grain, bracts removed (5 DPA)0.094077400.1700020.199484
CAR15Developing grain, bracts removed (15 DPA)0.05483240.06607170.156620.316999



CDS Structure of MLOC_39175






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39175.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_39175.1CUST_5469_PI427708083AvailableAvailablecontig_2552486 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g01140.2 +3 3e-27 107 53/71 (75%) 13104.m00016 protein cytochrome P450 93A2, putative, expressed
TAIR PP10 AT3G20120.2 +3 5e-12 64 30/59 (51%) | Symbols: CYP705A21 | cytochrome P450, family 705, subfamily A, polypeptide 21 | chr3:7024576-7025789 FORWARD LENGTH=378