MLOC_39134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2951760.2202930.2140240.234221
LEAShoots from the seedlings (10 cm shoot stage)0.11205900.2110880.130234
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.014326500.0237664
ROORoots from the seedlings (10 cm shoot stage)1.843340.5789760.5139790.747153
NODDeveloping tillers at six leaf stage, 3rd internode000.009519710.0222551
CAR5Developing grain, bracts removed (5 DPA)00.017771400.0217338
CAR15Developing grain, bracts removed (15 DPA)0.01202270.01430480.03444250.0627684



CDS Structure of MLOC_39134






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_39134.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362588NoneNoneNoneNone
MLOC_39134.1CUST_2519_PI427708080AvailableAvailablecontig_2552365 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g23580.1 -1 0.0 1177 676/774 (87%) 13101.m02492 protein inorganic H+ pyrophosphatase, putative, expressed
TAIR PP10 AT1G15690.1 -1 0.0 1043 573/779 (74%) | Symbols: AVP1, ATAVP3, AVP-3, AtVHP1;1 | Inorganic H pyrophosphatase family protein | chr1:5399115-5402185 FORWARD LENGTH=770