- Predicted Gene MLOC_39065
MLOC_39065 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39065_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39065_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 45.4881 | 42.6134 | 40.6743 | 44.2187 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 36.9733 | 32.2156 | 36.0318 | 32.1737 |
INF1 | Young developing inflorescences (5mm) | 101.616 | 110.779 | 115.693 | 93.3223 |
INF2 | Developing inflorescences (1-1.5 cm) | 105.536 | 103.616 | 95.2722 | 113.698 |
ROO | Roots from the seedlings (10 cm shoot stage) | 24.6846 | 35.9284 | 29.1023 | 44.2944 |
NOD | Developing tillers at six leaf stage, 3rd internode | 15.1291 | 27.8742 | 35.8184 | 105.418 |
CAR5 | Developing grain, bracts removed (5 DPA) | 51.1363 | 51.3949 | 54.4864 | 51.8768 |
CAR15 | Developing grain, bracts removed (15 DPA) | 18.5271 | 15.6007 | 16.9115 | 39.0883 |
CDS Structure of MLOC_39065
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39065.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g07050.1 |
+2 |
0.0 |
1025 |
494/517 (96%) |
13105.m00763 protein pre-mRNA-processing-splicing factor 8, putative, expressed |
TAIR PP10 |
AT1G80070.1 |
+2 |
0.0 |
950 |
451/517 (87%) |
| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359 |