- Predicted Gene MLOC_39021
MLOC_39021 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_39021_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_39021_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.5319 | 7.15872 | 7.22546 | 6.26335 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.6402 | 10.0141 | 7.09813 | 7.45829 |
INF1 | Young developing inflorescences (5mm) | 9.24444 | 9.55441 | 9.39285 | 7.15547 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.84652 | 9.76018 | 10.3784 | 9.81338 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.1437 | 9.99125 | 8.93786 | 10.2863 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.8137 | 4.84819 | 3.49237 | 14.1722 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.09531 | 5.44141 | 6.2932 | 5.11705 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.15069 | 5.02188 | 5.47138 | 10.6837 |
CDS Structure of MLOC_39021
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_39021.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g29590.1 |
+2 |
6e-31 |
126 |
61/87 (70%) |
13108.m03058 protein zinc finger, C3HC4 type family protein, expressed |
TAIR PP10 |
AT1G11020.1 |
+2 |
3e-21 |
96 |
53/88 (60%) |
RING/FYVE/PHD zinc finger superfamily protein | chr1:3676968-3678350 FORWARD LENGTH=321 |