MLOC_3897 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.741623.671223.20620
LEAShoots from the seedlings (10 cm shoot stage)22.136214.398423.09140
INF1Young developing inflorescences (5mm)9.2332422.848424.04990
INF2Developing inflorescences (1-1.5 cm)18.932218.950723.00350
ROORoots from the seedlings (10 cm shoot stage)27.211143.172623.19480
NODDeveloping tillers at six leaf stage, 3rd internode26.240588.244257.74850
CAR5Developing grain, bracts removed (5 DPA)25.430545.607535.59850
CAR15Developing grain, bracts removed (15 DPA)6.5863912.79642.933810



CDS Structure of MLOC_3897






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK374635
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374635CUST_14399_PI427708083NoneNoneNone
MLOC_29719.1NoneAvailableAvailablecontig_2030340 (Not mapped)
MLOC_33168.1NoneAvailableNonecontig_23501 (Not mapped)
MLOC_3897.1NoneAvailableNonecontig_1342689 (Not mapped)
MLOC_71527.1NoneAvailableNonecontig_600038 (Not mapped)
MLOC_80450.1NoneAvailableNonecontig_905749 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----