MLOC_38967 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.075659.917337.682817.87647
LEAShoots from the seedlings (10 cm shoot stage)7.151365.013292.559934.80707
INF1Young developing inflorescences (5mm)89.859786.458178.67975.7948
INF2Developing inflorescences (1-1.5 cm)150.224108.28399.2456141.435
ROORoots from the seedlings (10 cm shoot stage)0.5217482.742712.228163.60421
NODDeveloping tillers at six leaf stage, 3rd internode00.2023580.2508241.43565
CAR5Developing grain, bracts removed (5 DPA)25.521722.186724.197425.5636
CAR15Developing grain, bracts removed (15 DPA)22.683821.224422.239852.1247



CDS Structure of MLOC_38967






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38967.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38967.2CUST_5441_PI427708083AvailableAvailablecontig_2551893 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g12840.1 -2 7e-83 278 159/308 (52%) 13102.m01414 protein DEAD-box ATP-dependent RNA helicase, putative, expressed
TAIR PP10None-----