MLOC_38960 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.973712.23459.8416113.0625
LEAShoots from the seedlings (10 cm shoot stage)36.592461.800760.340851.8437
INF1Young developing inflorescences (5mm)18.430619.657321.021118.2502
INF2Developing inflorescences (1-1.5 cm)18.318619.185820.023622.0629
ROORoots from the seedlings (10 cm shoot stage)2.823195.345364.661696.95158
NODDeveloping tillers at six leaf stage, 3rd internode26.527838.440542.8823148.808
CAR5Developing grain, bracts removed (5 DPA)17.127420.20220.073320.0082
CAR15Developing grain, bracts removed (15 DPA)5.655765.612046.5075214.1691



CDS Structure of MLOC_38960






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355415
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355415CUST_14012_PI427708083NoneNoneNone
MLOC_38960.1NoneAvailableAvailablecontig_2551881 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----