- Predicted Gene MLOC_38930
MLOC_38930 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38930_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38930_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 37.3682 | 21.0002 | 18.8664 | 22.1125 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.01423 | 1.38017 | 1.36505 | 2.57708 |
INF1 | Young developing inflorescences (5mm) | 63.8491 | 95.4107 | 86.5037 | 68.0991 |
INF2 | Developing inflorescences (1-1.5 cm) | 67.0376 | 79.876 | 70.0976 | 77.0584 |
ROO | Roots from the seedlings (10 cm shoot stage) | 45.4283 | 23.4826 | 24.5624 | 25.5565 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.32886 | 1.16331 | 0.201383 | 2.32012 |
CAR5 | Developing grain, bracts removed (5 DPA) | 87.7487 | 83.0952 | 82.0146 | 77.3008 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.57743 | 2.05528 | 3.57635 | 7.23559 |
CDS Structure of MLOC_38930
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38930.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g47600.1 |
+3 |
3e-80 |
247 |
114/143 (80%) |
13106.m05056 protein thaumatin family domain containing protein, expressed |
TAIR PP10 |
AT1G18250.1 |
+3 |
5e-61 |
196 |
97/142 (68%) |
| Symbols: ATLP-1 | Pathogenesis-related thaumatin superfamily protein | chr1:6277024-6278005 REVERSE LENGTH=243 |