MLOC_38919 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.4752250.4325590.3968470.365124
CAR15Developing grain, bracts removed (15 DPA)0.8990480.5352811.307631.64103



CDS Structure of MLOC_38919






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38919.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38919.2CUST_5431_PI427708083AvailableAvailablecontig_2551775 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g04460.1 +2 4e-20 71 34/57 (60%) 13103.m00456 protein outer mitochondrial membrane porin, putative, expressed
TAIR PP10None-----