- Predicted Gene MLOC_38901
MLOC_38901 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38901_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38901_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.82764 | 5.08625 | 4.92132 | 5.10098 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.66687 | 2.38264 | 2.39455 | 2.53267 |
INF1 | Young developing inflorescences (5mm) | 5.72942 | 7.79316 | 7.03571 | 5.15475 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.59791 | 7.38475 | 6.63559 | 6.55023 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.09886 | 4.71042 | 3.17989 | 5.1768 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.13592 | 3.9488 | 4.28657 | 12.0077 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.58062 | 3.94293 | 4.146 | 3.39104 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.12117 | 2.18024 | 2.92618 | 5.84517 |
CDS Structure of MLOC_38901
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38901.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g55360.1 |
+1 |
0.0 |
667 |
321/370 (87%) |
13104.m05739 protein ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
TAIR PP10 |
AT5G10790.1 |
+1 |
3e-143 |
432 |
216/379 (57%) |
| Symbols: UBP22 | ubiquitin-specific protease 22 | chr5:3410638-3412559 FORWARD LENGTH=557 |