- Predicted Gene MLOC_38891
MLOC_38891 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.5521 | 15.5157 | 23.164 | 15.0521 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.6938 | 15.4085 | 14.1422 | 10.3098 |
| INF1 | Young developing inflorescences (5mm) | 9.45071 | 12.581 | 13.8506 | 9.23741 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.2199 | 15.248 | 16.9166 | 17.4405 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 43.4021 | 29.9293 | 54.1952 | 32.4096 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 27.8259 | 32.7205 | 34.1047 | 78.6905 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.3973 | 23.0799 | 30.4673 | 24.3172 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.3392 | 11.2716 | 12.2356 | 25.9364 |
CDS Structure of MLOC_38891
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38891.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g15000.1 |
+3 |
4e-44 |
160 |
94/144 (65%) |
13103.m01752 protein Zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT3G09770.2 |
+3 |
3e-26 |
107 |
61/103 (59%) |
RING/U-box superfamily protein | chr3:2996629-2997835 REVERSE LENGTH=341 |