MLOC_38890 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4246561.145030.2946260
LEAShoots from the seedlings (10 cm shoot stage)0.1733620.1813860.2928910
INF1Young developing inflorescences (5mm)3.454754.009063.097380
INF2Developing inflorescences (1-1.5 cm)3.678024.414964.077040
ROORoots from the seedlings (10 cm shoot stage)1.625070.9557560.3478250
NODDeveloping tillers at six leaf stage, 3rd internode0.09146380.2703861.365790
CAR5Developing grain, bracts removed (5 DPA)1.216531.448931.696940
CAR15Developing grain, bracts removed (15 DPA)0.2243050.2290970.3323980



CDS Structure of MLOC_38890






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356167
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356167CUST_19624_PI427708080NoneNoneNone
MLOC_29765.1NoneAvailableNonecontig_2035179 (Not mapped)
MLOC_30754.1NoneAvailableNonecontig_2123438 (Not mapped)
MLOC_31527.1NoneAvailableNonecontig_2198182 (Not mapped)
MLOC_32933.1NoneAvailableNonecontig_2330526 (Not mapped)
MLOC_33012.1NoneAvailableNonecontig_2337217 (Not mapped)
MLOC_33870.1NoneAvailableNonecontig_2410530 (Not mapped)
MLOC_34335.1NoneAvailableNonecontig_2435919 (Not mapped)
MLOC_38890.1NoneAvailableNonecontig_2551659 (Not mapped)
MLOC_42246.1NoneAvailableNonecontig_2633149 (Not mapped)
MLOC_43581.1NoneAvailableNonecontig_271459 (Mapped)
MLOC_48741.1NoneAvailableAvailablecontig_328857 (Mapped)
MLOC_68961.1NoneAvailableNonecontig_556477 (Not mapped)
MLOC_75544.1NoneAvailableNonecontig_681862 (Not mapped)
MLOC_75800.1NoneAvailableNonecontig_6898 (Mapped)
MLOC_77660.1NoneAvailableNonecontig_766286 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----