- Predicted Gene MLOC_38862
MLOC_38862 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 23.3645 | 28.0948 | 28.7928 | 22.8911 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 35.2605 | 48.7421 | 49.1201 | 32.998 |
INF1 | Young developing inflorescences (5mm) | 69.7737 | 72.196 | 66.1189 | 49.0727 |
INF2 | Developing inflorescences (1-1.5 cm) | 46.1928 | 47.0543 | 48.5864 | 43.3961 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.7578 | 28.5656 | 33.3425 | 28.513 |
NOD | Developing tillers at six leaf stage, 3rd internode | 80.6126 | 75.5008 | 108.778 | 248.012 |
CAR5 | Developing grain, bracts removed (5 DPA) | 34.1999 | 34.1305 | 34.913 | 27.3624 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.87025 | 3.68586 | 3.38256 | 6.06393 |
CDS Structure of MLOC_38862
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38862.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g63330.1 |
-1 |
0.0 |
630 |
323/346 (93%) |
13103.m07019 protein aspartokinase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT5G13280.1 |
-1 |
0.0 |
550 |
284/349 (81%) |
| Symbols: AK-LYS1, AK1, AK | aspartate kinase 1 | chr5:4249516-4252654 FORWARD LENGTH=569 |