MLOC_38862 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.364528.094828.792822.8911
LEAShoots from the seedlings (10 cm shoot stage)35.260548.742149.120132.998
INF1Young developing inflorescences (5mm)69.773772.19666.118949.0727
INF2Developing inflorescences (1-1.5 cm)46.192847.054348.586443.3961
ROORoots from the seedlings (10 cm shoot stage)21.757828.565633.342528.513
NODDeveloping tillers at six leaf stage, 3rd internode80.612675.5008108.778248.012
CAR5Developing grain, bracts removed (5 DPA)34.199934.130534.91327.3624
CAR15Developing grain, bracts removed (15 DPA)2.870253.685863.382566.06393



CDS Structure of MLOC_38862






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38862.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38862.3CUST_11708_PI427708080AvailableAvailablecontig_2551600 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g63330.1 -1 0.0 630 323/346 (93%) 13103.m07019 protein aspartokinase, chloroplast precursor, putative, expressed
TAIR PP10 AT5G13280.1 -1 0.0 550 284/349 (81%) | Symbols: AK-LYS1, AK1, AK | aspartate kinase 1 | chr5:4249516-4252654 FORWARD LENGTH=569