MLOC_3886 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.9841 | 18.986 | 16.0367 | 16.1864 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.6667 | 14.8323 | 14.1514 | 11.4975 |
| INF1 | Young developing inflorescences (5mm) | 18.6574 | 17.7808 | 18.6445 | 13.9806 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.3792 | 16.7984 | 14.924 | 15.1174 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.5134 | 16.5482 | 15.9059 | 16.9076 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.0109 | 3.09005 | 7.65563 | 11.1099 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 23.7628 | 24.1975 | 26.5291 | 21.9666 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.74108 | 5.24759 | 4.29614 | 11.0775 |
CDS Structure of MLOC_3886
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3886.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g42920.1 |
+1 |
0.0 |
716 |
366/383 (96%) |
13104.m04248 protein dehydrogenase, putative, expressed |
| TAIR PP10 |
AT5G14590.1 |
+1 |
0.0 |
661 |
335/381 (88%) |
Isocitrate/isopropylmalate dehydrogenase family protein | chr5:4703533-4706627 REVERSE LENGTH=485 |
