- Predicted Gene MLOC_38808
MLOC_38808 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 35.3679 | 41.4127 | 46.6344 | 40.9848 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 72.2623 | 97.5001 | 81.6603 | 75.0161 |
| INF1 | Young developing inflorescences (5mm) | 38.3078 | 37.272 | 38.1873 | 31.3722 |
| INF2 | Developing inflorescences (1-1.5 cm) | 43.7664 | 43.5349 | 46.8798 | 47.5408 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 56.2355 | 92.5584 | 96.5199 | 110.009 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 52.6761 | 36.604 | 44.4734 | 148.031 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 44.9407 | 46.4622 | 42.4168 | 42.5619 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 97.4271 | 95.7231 | 65.7232 | 193.731 |
CDS Structure of MLOC_38808
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38808.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g35130.2 |
+2 |
2e-162 |
468 |
269/330 (82%) |
13102.m03811 protein AIG1, putative, expressed |
| TAIR PP10 |
AT1G33970.5 |
+2 |
4e-76 |
246 |
131/293 (45%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:12349614-12350960 REVERSE LENGTH=342 |