MLOC_38791 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0323747000.0397931
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.01155550.0228014
CAR5Developing grain, bracts removed (5 DPA)49.734248.602844.276745.4932
CAR15Developing grain, bracts removed (15 DPA)000.05190630.0733838



CDS Structure of MLOC_38791






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38791.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_38791.1CUST_11700_PI427708080AvailableAvailablecontig_2551368 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g46220.1 -2 2e-144 422 210/361 (58%) 13101.m04748 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT1G28600.1 -2 3e-85 270 158/372 (42%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10051228-10053073 REVERSE LENGTH=393