MLOC_38762 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains98.530588.019683.350693.8659
LEAShoots from the seedlings (10 cm shoot stage)35.813817.477715.435218.938
INF1Young developing inflorescences (5mm)62.49786.071174.139770.4953
INF2Developing inflorescences (1-1.5 cm)58.93770.196465.594478.6702
ROORoots from the seedlings (10 cm shoot stage)121.34186.045374.7329103.469
NODDeveloping tillers at six leaf stage, 3rd internode36.274342.096223.1051116.923
CAR5Developing grain, bracts removed (5 DPA)43.340543.368245.014447.0099
CAR15Developing grain, bracts removed (15 DPA)23.024119.808122.555356.68



CDS Structure of MLOC_38762






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_38762.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366309NoneNoneNoneNone
MLOC_38762.1CUST_2502_PI427708080AvailableAvailablecontig_2551298 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18220.1 +2 0.0 1082 551/608 (91%) 13103.m02182 protein pyruvate decarboxylase isozyme 2, putative, expressed
TAIR PP10 AT4G33070.1 +2 0.0 920 476/611 (78%) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607