- Predicted Gene MLOC_38762
MLOC_38762 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38762_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38762_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 98.5305 | 88.0196 | 83.3506 | 93.8659 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 35.8138 | 17.4777 | 15.4352 | 18.938 |
INF1 | Young developing inflorescences (5mm) | 62.497 | 86.0711 | 74.1397 | 70.4953 |
INF2 | Developing inflorescences (1-1.5 cm) | 58.937 | 70.1964 | 65.5944 | 78.6702 |
ROO | Roots from the seedlings (10 cm shoot stage) | 121.341 | 86.0453 | 74.7329 | 103.469 |
NOD | Developing tillers at six leaf stage, 3rd internode | 36.2743 | 42.0962 | 23.1051 | 116.923 |
CAR5 | Developing grain, bracts removed (5 DPA) | 43.3405 | 43.3682 | 45.0144 | 47.0099 |
CAR15 | Developing grain, bracts removed (15 DPA) | 23.0241 | 19.8081 | 22.5553 | 56.68 |
CDS Structure of MLOC_38762
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38762.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g18220.1 |
+2 |
0.0 |
1082 |
551/608 (91%) |
13103.m02182 protein pyruvate decarboxylase isozyme 2, putative, expressed |
TAIR PP10 |
AT4G33070.1 |
+2 |
0.0 |
920 |
476/611 (78%) |
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607 |