MLOC_3876 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.480994.83123.739113.54543
LEAShoots from the seedlings (10 cm shoot stage)28.439543.148430.997824.012
INF1Young developing inflorescences (5mm)5.540216.145316.024164.06959
INF2Developing inflorescences (1-1.5 cm)4.951315.126244.571644.56096
ROORoots from the seedlings (10 cm shoot stage)2.634143.109383.125862.99204
NODDeveloping tillers at six leaf stage, 3rd internode13.920712.825212.956535.2752
CAR5Developing grain, bracts removed (5 DPA)8.73579.331199.853867.46071
CAR15Developing grain, bracts removed (15 DPA)2.258831.922572.795394.30046



CDS Structure of MLOC_3876






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3876.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3876.1CUST_11697_PI427708080AvailableAvailablecontig_134128 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g57290.4 -2 0.0 671 327/360 (91%) 13102.m06603 protein cytochrome P450, putative, expressed
TAIR PP10 AT1G31800.1 -2 0.0 607 291/360 (81%) | Symbols: CYP97A3, LUT5 | cytochrome P450, family 97, subfamily A, polypeptide 3 | chr1:11396440-11399470 FORWARD LENGTH=595