MLOC_3876 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.48099 | 4.8312 | 3.73911 | 3.54543 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 28.4395 | 43.1484 | 30.9978 | 24.012 |
INF1 | Young developing inflorescences (5mm) | 5.54021 | 6.14531 | 6.02416 | 4.06959 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.95131 | 5.12624 | 4.57164 | 4.56096 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.63414 | 3.10938 | 3.12586 | 2.99204 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.9207 | 12.8252 | 12.9565 | 35.2752 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.7357 | 9.33119 | 9.85386 | 7.46071 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.25883 | 1.92257 | 2.79539 | 4.30046 |
CDS Structure of MLOC_3876
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3876.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g57290.4 |
-2 |
0.0 |
671 |
327/360 (91%) |
13102.m06603 protein cytochrome P450, putative, expressed |
TAIR PP10 |
AT1G31800.1 |
-2 |
0.0 |
607 |
291/360 (81%) |
| Symbols: CYP97A3, LUT5 | cytochrome P450, family 97, subfamily A, polypeptide 3 | chr1:11396440-11399470 FORWARD LENGTH=595 |