MLOC_3873 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_3873_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_3873_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.597 | 11.9434 | 9.41504 | 4.53328 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.6844 | 41.1236 | 41.3369 | 19.7017 |
INF1 | Young developing inflorescences (5mm) | 5.58842 | 7.52543 | 10.3431 | 3.60404 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.88076 | 4.87784 | 5.1172 | 3.64389 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.824027 | 0.730595 | 4.17259 | 0.73701 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.17048 | 6.02493 | 6.57358 | 12.5625 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.82523 | 4.88047 | 5.09766 | 2.96437 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.80731 | 2.37012 | 0.381025 | 2.52005 |
CDS Structure of MLOC_3873
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3873.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g21820.1 |
-3 |
7e-39 |
143 |
71/80 (89%) |
13101.m02319 protein preprotein translocase subunit secA, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT4G01800.1 |
-3 |
4e-37 |
137 |
66/83 (80%) |
| Symbols: AGY1, AtcpSecA, SECA1 | Albino or Glassy Yellow 1 | chr4:770926-776131 REVERSE LENGTH=1022 |