MLOC_3872 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 93.0462 | 74.6666 | 80.5987 | 86.3862 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 50.5168 | 21.6448 | 27.2484 | 28.6226 |
| INF1 | Young developing inflorescences (5mm) | 44.1823 | 43.3068 | 46.8042 | 42.1373 |
| INF2 | Developing inflorescences (1-1.5 cm) | 44.0907 | 35.1427 | 45.7002 | 49.6648 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.7294 | 25.0927 | 44.6882 | 35.6691 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 40.2107 | 29.3444 | 31.3347 | 83.5262 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 47.8067 | 49.5431 | 41.7376 | 52.0635 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 106.763 | 108.042 | 105.412 | 293.268 |
CDS Structure of MLOC_3872
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3872.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g02060.1 |
-3 |
5e-64 |
201 |
111/146 (76%) |
13105.m00159 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
| TAIR PP10 |
AT2G28900.1 |
-3 |
1e-40 |
140 |
73/130 (56%) |
| Symbols: OEP16, ATOEP16-L, ATOEP16-1, OEP16-1 | outer plastid envelope protein 16-1 | chr2:12414423-12415459 REVERSE LENGTH=148 |
