- Predicted Gene MLOC_38677
MLOC_38677 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_38677_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_38677_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.74743 | 1.27673 | 2.03584 | 1.65136 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.06362 | 2.44213 | 3.62969 | 2.28686 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.125193 | 0.039881 | 0 | 0.114192 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.52805 | 1.92827 | 3.42592 | 2.75175 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.42142 | 5.3293 | 2.92828 | 12.787 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.743513 | 0.601828 | 1.24494 | 0.939003 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.036372 | 0.0421866 | 0 | 0.136391 |
CDS Structure of MLOC_38677
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38677.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g42190.1 |
+1 |
2e-90 |
272 |
159/201 (79%) |
13105.m04486 protein NADPH-dependent FMN reductase domain containing protein, expressed |
TAIR PP10 |
AT4G27270.1 |
+1 |
3e-84 |
256 |
144/201 (72%) |
Quinone reductase family protein | chr4:13661458-13663243 REVERSE LENGTH=205 |