MLOC_38630 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.190313.211514.217516.1468
LEAShoots from the seedlings (10 cm shoot stage)11.00378.677829.962759.65659
INF1Young developing inflorescences (5mm)16.008919.850417.82617.4239
INF2Developing inflorescences (1-1.5 cm)26.987624.709920.78929.5768
ROORoots from the seedlings (10 cm shoot stage)10.409211.410911.170416.7032
NODDeveloping tillers at six leaf stage, 3rd internode9.2842718.400221.374971.6474
CAR5Developing grain, bracts removed (5 DPA)17.102319.003519.131420.1011
CAR15Developing grain, bracts removed (15 DPA)8.431077.536086.3460619.471



CDS Structure of MLOC_38630






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374566
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374566CUST_22685_PI427708080NoneNoneNone
MLOC_32966.1NoneAvailableNonecontig_233397 (Not mapped)
MLOC_38630.1NoneAvailableAvailablecontig_2550946 (Mapped)
MLOC_40737.2NoneAvailableNonecontig_256367 (Mapped)
MLOC_51690.1NoneAvailableNonecontig_370271 (Mapped)
MLOC_62215.1NoneAvailableNonecontig_463095 (Mapped)
MLOC_72426.1NoneAvailableNonecontig_61615 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----