MLOC_38618 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains47.70128.488326.08660
LEAShoots from the seedlings (10 cm shoot stage)22.948431.566240.09910
INF1Young developing inflorescences (5mm)20.295526.427630.190
INF2Developing inflorescences (1-1.5 cm)15.397321.118613.87650
ROORoots from the seedlings (10 cm shoot stage)71.505835.81230.5890
NODDeveloping tillers at six leaf stage, 3rd internode57.868668.665861.37450
CAR5Developing grain, bracts removed (5 DPA)10.16817.7942210.61180
CAR15Developing grain, bracts removed (15 DPA)4.075862.300873.362540



CDS Structure of MLOC_38618






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249331.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249331.1CUST_18678_PI427708080NoneNoneNone
MLOC_27673.1NoneAvailableNonecontig_185273 (Mapped)
MLOC_3474.3NoneAvailableAvailablecontig_131075 (Not mapped)
MLOC_38618.1NoneAvailableNonecontig_2550899 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----