- Predicted Gene MLOC_38617
MLOC_38617 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.635773 | 0.355523 | 0.322275 | 0.44151 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.280726 | 0.053916 | 0.21007 | 0.160067 |
| INF1 | Young developing inflorescences (5mm) | 0.138719 | 0.134892 | 0.147456 | 0.128827 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.167543 | 0.134856 | 0.198936 | 0.193428 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.139394 | 0.47926 | 0.324931 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.805195 | 0.916015 | 0.0833088 | 2.22186 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.192192 | 0.183658 | 0.216567 | 0.215123 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0770652 | 0.068849 | 0.028355 | 0.181721 |
CDS Structure of MLOC_38617
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_38617.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g05450.1 |
-1 |
7e-46 |
163 |
94/147 (64%) |
13103.m00589 protein expressed protein |
| TAIR PP10 |
AT2G46000.1 |
-1 |
3e-17 |
82 |
49/119 (41%) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18921194-18922047 REVERSE LENGTH=208 |